RNA-Seq Software

BlueBee Genomics

The BlueBee platform is a production-ready, robust infrastructure that is easy to use for any researcher. It can be used for analysing data from QuantSeq, CORALL, and SLAMseq experiments. There is no prior bioinformatic experience required.

Each purchased QuantSeq and CORALL kit includes a code for free data analysis including differential expres­sion (DE) analysis using the BlueBee® Genomics Platform (for fastq(.gz) file sizes up to 1.5 GB). The activation code can be found on a card within the Library Generation Module (stored at -20 °C). Each provided code allows for the same number of data analysis pipeline runs as the number of reactions included in the library prep kit (i.e., for a 24 prep kit, 24 analysis runs can be performed).

Activation codes for additional pipeline runs can also be purchased (Cat. No. 090, 091, 093, and 094).

QuantSeq workflow 

CORALL workflow 

SLAMDunk on BlueBee 

BlueBee Genomics provides an easily accessible and secure platform for performing automated analysis of SLAMseq sequencing data. The SLAMseq Data Analysis Pipeline, SLAMdunk, is available for human and mouse samples , and are adapted specifically for the analysis of SLAMseq sequencing data. Access to the Data Analysis Pipeline is possible with the activation codes:

SLAMseq workflow

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Mix² Software

Mix² is a software tool for the accurate estimation of RNA concentration from RNA-Seq Data.  

  • Precise transcripts concentration estimates
  • Accurate detection of differential expression
  • Exceptional reproducibility across variable conditions
  • Fast run-times and small memory footprint

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Mix² RNA-Seq Data Analysis Software - Lexogen

Mix² Workflow

Mix² Workflow

Implementation and run-time performance

The Mix² software runs as a 64-bit Linux command line tool. For an up-to-date list of supported distributors, please refer to the user guide.

Ordering information:

Cat.no.: 023 - Description:Mix2 RNA-Seq Data Analysis Software - Size: 1 license

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